Browsing by Author "Gyanendra Pratap Singh"

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Diagnosis and Detection of Major Airborne Fungal Phytopathogens
(Springer Science+Business Media, 2025) Ravindra Kumar; Seweta Srivastava; Aishwarya Singh Rathore; R. C. Tiwari; Shyam Saran Vaish; Shiv Shankar Patel; S. Dasaratha Kumar; Sunil Kashyap; Udai B. Singh; Gyanendra Pratap Singh
Food safety and security are at risk because agricultural crops are infected by a number of pathogens, including bacteria, fungus, viruses, viroids, and plant viruses. The diminutions in foods caused by these phytopathogenic agents have been persistent concerns related to agriculture for generations all throughout the world. Airborne fungal phytopathogens create significant threats to agricultural ecosystems, causing sizeable economic losses and jeopardizing food security worldwide. When developing management methods, the most crucial factors are thought to be the prompt detection and precise identification of the causative agents linked to crop diseases. The methods and technologies now used in the identification and detection of the main airborne fungal phytopathogens are thoroughly reviewed in this chapter. Firstly, traditional diagnostic techniques such as microscopy, culture-based methods, and air samplers are discussed, highlighting their advantages and limitations. Additionally, molecular techniques, including polymerase chain reaction (PCR)-based assays, loop-mediated isothermal amplification (LAMP), etc., are examined for their sensitivity, specificity, and applicability in detecting airborne fungal pathogens. Overall, this chapter aims to provide valuable insights for researchers, practitioners, and policymakers involved in the management and surveillance of airborne fungal phytopathogens, fostering advancements in disease control strategies and safeguarding global crop production. © 2025 The Editor(s) (if applicable) and The Author(s), under exclusive license to Springer Nature Singapore Pte Ltd.
Genetic dissection of grain zinc concentration in spring wheat for mainstreaming biofortification in CIMMYT wheat breeding
(Nature Publishing Group, 2018) Govindan Velu; Ravi Prakash Singh; Leonardo Crespo-Herrera; Philomin Juliana; Susanne Dreisigacker; Ravi Valluru; James Stangoulis; Virinder Singh Sohu; Gurvinder Singh Mavi; Vinod Kumar Mishra; Arun Balasubramaniam; Ravish Chatrath; Vikas Gupta; Gyanendra Pratap Singh; Arun Kumar Joshi
Wheat is an important staple that acts as a primary source of dietary energy, protein, and essential micronutrients such as iron (Fe) and zinc (Zn) for the world’s population. Approximately two billion people suffer from micronutrient deficiency, thus breeders have crossed high Zn progenitors such as synthetic hexaploid wheat, T. dicoccum, T. spelta, and landraces to generate wheat varieties with competitive yield and enhanced grain Zn that are being adopted by farmers in South Asia. Here we report a genome-wide association study (GWAS) using the wheat Illumina iSelect 90 K Infinitum SNP array to characterize grain Zn concentrations in 330 bread wheat lines. Grain Zn phenotype of this HarvestPlus Association Mapping (HPAM) panel was evaluated across a range of environments in India and Mexico. GWAS analysis revealed 39 marker-trait associations for grain Zn. Two larger effect QTL regions were found on chromosomes 2 and 7. Candidate genes (among them zinc finger motif of transcription-factors and metal-ion binding genes) were associated with the QTL. The linked markers and associated candidate genes identified in this study are being validated in new biparental mapping populations for marker-assisted breeding. © 2018, The Author(s).
Zinc and iron concentration QTL mapped in a Triticum spelta × T. Aestivum cross
(Springer Verlag, 2014) Jayasudha Srinivasa; Balasubramaniam Arun; Vinod Kumar Mishra; Gyanendra Pratap Singh; Govindan Velu; Raman Babu; Neeraj Kumar Vasistha; Arun Kumar Joshi
The genetic basis of accumulation in the grain of Zn and Fe was investigated via QTL mapping in a recombinant inbred line (RIL) population bred from a cross between Triticum spelta and T. aestivum. The concentration of the two elements was measured from grain produced in three locations over two consecutive cropping seasons and from a greenhouse trial. The range in Zn and Fe concentration across the RILs was, respectively, 18.8–73.5 and 25.3–59.5 ppm, and the concentrations of the two elements were positively correlated with one another (rp =+0.79). Ten QTL (five each for Zn and Fe accumulation) were detected, mapping to seven different chromosomes. The chromosome 2B and 6A grain Zn QTL were consistently expressed across environments. The proportion of the phenotype explained (PVE) by QZn.bhu-2B was >16 %, and the locus was closely linked to the SNP marker 1101425|F|0, while QZn.bhu-6A (7.0 % PVE) was closely linked to DArT marker 3026160|F|0. Of the five Fe QTL detected, three, all mapping to chromosome 1A were detected in all seven environments. The PVE for QFe.bhu-3B was 26.0 %. © Springer-Verlag Berlin Heidelberg 2014.